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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3pne H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.933
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.928
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.927
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.925
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.923
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.923
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.913
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.912
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.912
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.910
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.910
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.910
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.910
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.909
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.909
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.908
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.908
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.908
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.907
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.905
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.905
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.905
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.904
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.903
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.893
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.892
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.892
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.892
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.891
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.891
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.890
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.890
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.889
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.889
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.889
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.889
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.889
3png H4BNitric oxide synthase, brain 1.14.13.39 0.888
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.886
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.886
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.882
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.875
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.875
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.874
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.874
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.872
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.871
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.871
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.871
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.869
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.865
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.864
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.857
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.854
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.852
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.848
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.845
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.843
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.836
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.833
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.822
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.809
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.805
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.797
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.796
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.792
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.785
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.758
4e5i 0N9Polymerase acidic protein / 0.744
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.732
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.723
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.719
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.703
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.702
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.700
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.697
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.677
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.670
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.668
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.657
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.654