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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3o8p BMU Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3o8p BMUMitogen-activated protein kinase 14 / 1.121
3oc1 BMUMitogen-activated protein kinase 14 / 0.823
3gcs BAXMitogen-activated protein kinase 14 / 0.789
1kv1 BMUMitogen-activated protein kinase 14 / 0.786
3o8t BMUMitogen-activated protein kinase 14 / 0.782
3o8u BMUMitogen-activated protein kinase 14 / 0.769
3p78 P78Mitogen-activated protein kinase 14 / 0.754
3lfe Z84Mitogen-activated protein kinase 14 / 0.742
3p5k P5KMitogen-activated protein kinase 14 / 0.704
3gcq 1BUMitogen-activated protein kinase 14 / 0.688
3p7c P7CMitogen-activated protein kinase 14 / 0.672
4jbp YPHAurora kinase A 2.7.11.1 0.671
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
4e5i 0N9Polymerase acidic protein / 0.660
3qri 919Tyrosine-protein kinase ABL1 2.7.10.2 0.659
4r7i STIMacrophage colony-stimulating factor 1 receptor 2.7.10.1 0.659
3p79 P79Mitogen-activated protein kinase 14 / 0.656
4neu Q1AReceptor-interacting serine/threonine-protein kinase 1 2.7.11.1 0.656
4jbo WPHAurora kinase A 2.7.11.1 0.654
3iw8 HIZMitogen-activated protein kinase 14 / 0.653
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 0.653
4asd BAXVascular endothelial growth factor receptor 2 2.7.10.1 0.651
3uvr 06FMitogen-activated protein kinase 14 / 0.650
5hid B1ESerine/threonine-protein kinase B-raf 2.7.11.1 0.650