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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3len ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3len ZSTAldose reductase 1.1.1.21 1.295
3mb9 ZSTAldose reductase 1.1.1.21 1.204
2fz8 ZSTAldose reductase 1.1.1.21 1.129
2pdi ZSTAldose reductase 1.1.1.21 1.110
2pdb ZSTAldose reductase 1.1.1.21 1.060
2hvn ZSTAldose reductase 1.1.1.21 1.057
2fz9 ZSTAldose reductase 1.1.1.21 1.054
2duz ZSTAldose reductase 1.1.1.21 1.052
2hv5 ZSTAldose reductase 1.1.1.21 1.030
2dv0 ZSTAldose reductase 1.1.1.21 0.993
3m0i ZSTAldose reductase 1.1.1.21 0.970
2pd5 ZSTAldose reductase 1.1.1.21 0.931
2pdx ZSTAldose reductase 1.1.1.21 0.908
2pdq 47DAldose reductase 1.1.1.21 0.905
2hvo ZSTAldose reductase 1.1.1.21 0.887
1t40 ID5Aldose reductase 1.1.1.21 0.879
2pdf ZSTAldose reductase 1.1.1.21 0.878
1frb ZSTAldose reductase-related protein 2 / 0.845
2pdh 47DAldose reductase 1.1.1.21 0.791
2pdg 47DAldose reductase 1.1.1.21 0.790
1t41 ID5Aldose reductase 1.1.1.21 0.752
2pdm ZSTAldose reductase 1.1.1.21 0.720
3g5e Q74Aldose reductase 1.1.1.21 0.711
2pzn 393Aldose reductase 1.1.1.21 0.706
1z3n 3NAAldose reductase 1.1.1.21 0.701
3m64 393Aldose reductase 1.1.1.21 0.696
2pdn 47DAldose reductase 1.1.1.21 0.695
2dux ZSTAldose reductase 1.1.1.21 0.688
3lbo LDTAldose reductase 1.1.1.21 0.684
3mc5 393Aldose reductase 1.1.1.21 0.682
2ikj 393Aldose reductase 1.1.1.21 0.681
3ld5 LDTAldose reductase 1.1.1.21 0.680
2pdu 393Aldose reductase 1.1.1.21 0.677
2pdc 393Aldose reductase 1.1.1.21 0.670
3lql LDTAldose reductase 1.1.1.21 0.662
3ght LDTAldose reductase 1.1.1.21 0.660
2g5o DRQEstrogen receptor / 0.659