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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jx4 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.918
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.904
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.887
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.885
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.885
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.884
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.884
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.884
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.884
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.884
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.883
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.883
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.882
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.882
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.881
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.881
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.880
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.880
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.879
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.879
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.878
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.876
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.876
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.873
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.870
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.869
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.869
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.868
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.868
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.867
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.867
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.866
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.866
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.866
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.866
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.865
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.865
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.865
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.864
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.864
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.863
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.863
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.863
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.862
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.862
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.861
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.861
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.861
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.861
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.859
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.851
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.851
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.850
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.849
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.848
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.847
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.843
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.842
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.841
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.839
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.838
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.837
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.834
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.833
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.832
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.830
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.830
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.829
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.824
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.816
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.809
3png H4BNitric oxide synthase, brain 1.14.13.39 0.808
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.807
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.803
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.803
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.797
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.795
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.791
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.790
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.788
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.784
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.765
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.758
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.742
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.716
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.713
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.711
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.709
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.702
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.696
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.689
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.680
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.679
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.662
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.659
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.657