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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jta H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.918
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.911
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.910
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.906
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.905
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.904
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.902
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.901
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.893
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.890
3png H4BNitric oxide synthase, brain 1.14.13.39 0.890
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.890
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.889
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.889
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.889
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.888
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.887
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.887
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.885
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.882
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.879
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.877
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.874
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.873
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.872
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.871
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.869
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.864
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.862
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.862
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.861
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.861
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.860
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.858
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.858
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.858
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.856
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.855
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.852
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.851
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.848
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.846
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.844
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.844
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.844
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.844
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.843
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.842
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.838
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.837
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.836
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.835
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.834
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.832
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.829
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.825
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.822
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.818
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.817
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.815
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.806
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.804
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.799
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.798
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.794
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.791
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.789
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.780
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.778
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.771
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.756
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.721
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.710
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.697
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.672
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.664
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.660
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.656
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.651