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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3hp2 P36 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3hp2 P36Mitogen-activated protein kinase 14 / 0.995
3roc 29AMitogen-activated protein kinase 14 / 0.837
3hll I45Mitogen-activated protein kinase 14 / 0.807
3iw7 IPKMitogen-activated protein kinase 14 / 0.732
3zsi 52PMitogen-activated protein kinase 14 / 0.704
3fmm XI2Mitogen-activated protein kinase 14 / 0.685
3fc1 52PMitogen-activated protein kinase 14 / 0.669
1zzl TZYMitogen-activated protein kinase 14 / 0.665
3kf7 L9GMitogen-activated protein kinase 14 / 0.665
3hp5 52PMitogen-activated protein kinase 14 / 0.662
3iw6 PP0Mitogen-activated protein kinase 14 / 0.661
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
3hub 469Mitogen-activated protein kinase 14 / 0.659
2yix YIXMitogen-activated protein kinase 14 / 0.652