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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3hhu 819 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3hhu 819Heat shock protein HSP 90-alpha / 1.084
1yc3 4BCHeat shock protein HSP 90-alpha / 0.823
2vci 2GJHeat shock protein HSP 90-alpha / 0.810
1yc1 4BCHeat shock protein HSP 90-alpha / 0.808
2yi6 6QMHeat shock protein HSP 90-alpha / 0.799
2bt0 CT5Heat shock protein HSP 90-alpha / 0.794
2vcj 2EQHeat shock protein HSP 90-alpha / 0.775
2xab VHDHeat shock protein HSP 90-alpha / 0.773
3k97 4CDHeat shock protein HSP 90-alpha / 0.758
1yc4 43PHeat shock protein HSP 90-alpha / 0.757
2byi 2DDHeat shock protein HSP 90-alpha / 0.755
4efu EFUHeat shock protein HSP 90-alpha / 0.752
2xjx XJXHeat shock protein HSP 90-alpha / 0.751
3ekr PY9Heat shock protein HSP 90-alpha / 0.747
2cct 2E1Heat shock protein HSP 90-alpha / 0.729
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.726
2uwd 2GGHeat shock protein HSP 90-alpha / 0.725
3eko PYUHeat shock protein HSP 90-alpha / 0.724
2xht C0YHeat shock protein HSP 90-alpha / 0.723
2ye4 2FYHeat shock protein HSP 90-alpha / 0.723
2bsm BSMHeat shock protein HSP 90-alpha / 0.717
2yk2 YJWHeat shock protein HSP 90-alpha / 0.715
2bre KJ2ATP-dependent molecular chaperone HSP82 / 0.696
2xjg XJGHeat shock protein HSP 90-alpha / 0.695
4bqj XKLHeat shock protein HSP 90-alpha / 0.683
2iws NP4ATP-dependent molecular chaperone HSP82 / 0.679
2xhx T5MHeat shock protein HSP 90-alpha / 0.676
2qfo A51Heat shock protein HSP 90-alpha / 0.674
4e5f 0N7Polymerase acidic protein / 0.663
2yec XQ0Heat shock protein HSP 90-alpha / 0.661
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
2yjw YJWHeat shock protein HSP 90-alpha / 0.653
3k98 1RCHeat shock protein HSP 90-alpha / 0.653
2brc CT5ATP-dependent molecular chaperone HSP82 / 0.650
4egk RDCHeat shock protein HSP 90-alpha / 0.650