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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ght LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ght LDTAldose reductase 1.1.1.21 1.107
3ghu LDTAldose reductase 1.1.1.21 1.105
3lbo LDTAldose reductase 1.1.1.21 1.101
3ghs LDTAldose reductase 1.1.1.21 1.068
3ghr LDTAldose reductase 1.1.1.21 1.067
3ld5 LDTAldose reductase 1.1.1.21 1.064
2qxw LDTAldose reductase 1.1.1.21 1.050
2i17 LDTAldose reductase 1.1.1.21 1.048
1us0 LDTAldose reductase 1.1.1.21 1.047
2i16 LDTAldose reductase 1.1.1.21 1.047
3lz5 LDTAldose reductase 1.1.1.21 1.032
3lql LDTAldose reductase 1.1.1.21 1.028
3m4h 388Aldose reductase 1.1.1.21 0.992
2iki 388Aldose reductase 1.1.1.21 0.917
2ikj 393Aldose reductase 1.1.1.21 0.856
3m64 393Aldose reductase 1.1.1.21 0.851
1t40 ID5Aldose reductase 1.1.1.21 0.818
2pdj 393Aldose reductase 1.1.1.21 0.806
3mc5 393Aldose reductase 1.1.1.21 0.801
2pzn 393Aldose reductase 1.1.1.21 0.792
2pdc 393Aldose reductase 1.1.1.21 0.787
1iei ZESAldose reductase 1.1.1.21 0.770
2pdp 393Aldose reductase 1.1.1.21 0.756
4gca 2X9Aldose reductase 1.1.1.21 0.748
1pwl BFIAldose reductase 1.1.1.21 0.744
2dux ZSTAldose reductase 1.1.1.21 0.736
2pdu 393Aldose reductase 1.1.1.21 0.733
3g5e Q74Aldose reductase 1.1.1.21 0.729
1z3n 3NAAldose reductase 1.1.1.21 0.727
2pdm ZSTAldose reductase 1.1.1.21 0.720
3t42 3T4Aldose reductase 1.1.1.21 0.716
3mb9 ZSTAldose reductase 1.1.1.21 0.713
2inz OHPAldose reductase 1.1.1.21 0.710
2ikh LITAldose reductase 1.1.1.21 0.706
2hvn ZSTAldose reductase 1.1.1.21 0.700
3s3g TLTAldose reductase 1.1.1.21 0.700
2pdl TOLAldose reductase 1.1.1.21 0.699
2pdn 47DAldose reductase 1.1.1.21 0.699
2pdg 47DAldose reductase 1.1.1.21 0.697
2nvc ITAAldose reductase 1.1.1.21 0.691
2iqd LPAAldose reductase 1.1.1.21 0.689
1frb ZSTAldose reductase-related protein 2 / 0.684
2hv5 ZSTAldose reductase 1.1.1.21 0.683
3m0i ZSTAldose reductase 1.1.1.21 0.682
1z89 62PAldose reductase 1.1.1.21 0.680
2pdq 47DAldose reductase 1.1.1.21 0.677
2hvo ZSTAldose reductase 1.1.1.21 0.675
2pdh 47DAldose reductase 1.1.1.21 0.665
5liu 388Aldo-keto reductase family 1 member B10 1.1.1 0.665
2duz ZSTAldose reductase 1.1.1.21 0.661
3len ZSTAldose reductase 1.1.1.21 0.660
4yu1 53NAldose reductase 1.1.1.21 0.658
1t41 ID5Aldose reductase 1.1.1.21 0.652