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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fmh 533 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fmh 533Mitogen-activated protein kinase 14 / 1.009
3flw FLWMitogen-activated protein kinase 14 / 0.908
3fly FLYMitogen-activated protein kinase 14 / 0.906
3fln 3FNMitogen-activated protein kinase 14 / 0.887
3flq 891Mitogen-activated protein kinase 14 / 0.850
3fls FLSMitogen-activated protein kinase 14 / 0.827
3fi4 FI4Mitogen-activated protein kinase 14 / 0.752
3que 3FFMitogen-activated protein kinase 14 / 0.717
3fml FMLMitogen-activated protein kinase 14 / 0.715
1oz1 FPHMitogen-activated protein kinase 14 / 0.706
2gtm LIDMitogen-activated protein kinase 14 / 0.705
4loo SB4Mitogen-activated protein kinase 14 / 0.705
3gc7 B45Mitogen-activated protein kinase 14 / 0.702
3fmn 530Mitogen-activated protein kinase 14 / 0.693
3mpa SB2Mitogen-activated protein kinase 14 / 0.685
1ouk 084Mitogen-activated protein kinase 14 / 0.684
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.666
3hl7 I47Mitogen-activated protein kinase 14 / 0.655