Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3erk SB4 Mitogen-activated protein kinase 1 2.7.11.24

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3erk SB4Mitogen-activated protein kinase 1 2.7.11.24 1.001
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4fv7 E94Mitogen-activated protein kinase 1 2.7.11.24 0.701
4jq7 KJQEpidermal growth factor receptor 2.7.10.1 0.688
4fux E75Mitogen-activated protein kinase 1 2.7.11.24 0.672
2x9f X9FEphrin type-B receptor 4 2.7.10.1 0.669
4kbc 1QJCasein kinase I isoform delta 2.7.11.1 0.669
4fv9 E71Mitogen-activated protein kinase 1 2.7.11.24 0.666
4jr3 KJREpidermal growth factor receptor 2.7.10.1 0.662
4e5f 0N7Polymerase acidic protein / 0.660
2o0u C0MMitogen-activated protein kinase 10 2.7.11.24 0.659
2z2w 770Wee1-like protein kinase 2.7.10.2 0.653
3biz 61EWee1-like protein kinase 2.7.10.2 0.652
1wzy F29Mitogen-activated protein kinase 1 2.7.11.24 0.650