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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3dqr H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.933
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.923
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.918
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.917
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.917
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.914
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.908
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.907
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.907
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.906
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.906
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.906
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.905
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.905
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.905
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.905
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.905
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.904
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.904
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.902
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.902
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.902
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.899
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.897
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.897
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.895
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.893
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.888
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.888
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.887
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.887
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.887
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.887
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.886
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.886
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.886
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.886
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.885
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.885
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.884
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.884
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.881
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.881
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.881
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.875
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.873
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.872
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.869
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.869
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.867
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.867
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.865
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.863
3png H4BNitric oxide synthase, brain 1.14.13.39 0.863
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.862
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.858
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.858
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.857
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.848
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.837
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.831
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.819
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.816
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.816
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.816
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.815
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.805
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.786
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.783
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.724
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.724
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.714
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.709
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.702
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.701
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.685
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.658
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.658