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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3c5u P41 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3c5u P41Mitogen-activated protein kinase 14 / 1.148
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
3fi3 JK2Mitogen-activated protein kinase 10 2.7.11.24 0.688
3fkn FKNMitogen-activated protein kinase 14 / 0.687
3fc1 52PMitogen-activated protein kinase 14 / 0.683
3iw7 IPKMitogen-activated protein kinase 14 / 0.678
4e5f 0N7Polymerase acidic protein / 0.660
2ghl LIBMitogen-activated protein kinase 14 / 0.659
2i0z FADNAD(FAD)-utilizing dehydrogenases / 0.658
3tti KBIMitogen-activated protein kinase 10 2.7.11.24 0.656
4loo SB4Mitogen-activated protein kinase 14 / 0.655
3flq 891Mitogen-activated protein kinase 14 / 0.653
3lt0 FT1Enoyl-ACP reductase / 0.652
3fml FMLMitogen-activated protein kinase 14 / 0.651
4eh5 0OMMitogen-activated protein kinase 14 / 0.650