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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3biz 61E Wee1-like protein kinase 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3biz 61EWee1-like protein kinase 2.7.10.2 1.165
2in6 839Wee1-like protein kinase 2.7.10.2 0.979
3bi6 396Wee1-like protein kinase 2.7.10.2 0.975
2z2w 770Wee1-like protein kinase 2.7.10.2 0.974
2io6 330Wee1-like protein kinase 2.7.10.2 0.961
3cqe P91Wee1-like protein kinase 2.7.10.2 0.860
3cr0 809Wee1-like protein kinase 2.7.10.2 0.858
1x8b 824Wee1-like protein kinase 2.7.10.2 0.857
2hy8 1STSerine/threonine-protein kinase PAK 1 2.7.11.1 0.735
1q3d STUGlycogen synthase kinase-3 beta 2.7.11.26 0.704
3cd3 STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.702
2x7f 824TRAF2 and NCK-interacting protein kinase 2.7.11.1 0.697
4fv9 E71Mitogen-activated protein kinase 1 2.7.11.24 0.690
2j0j 4STFocal adhesion kinase 1 2.7.10.2 0.689
2vd5 BI8Myotonin-protein kinase 2.7.11.1 0.689
2nry STUInterleukin-1 receptor-associated kinase 4 2.7.11.1 0.683
5hes 032Mitogen-activated protein kinase kinase kinase 20 2.7.11.25 0.676
4bgg 844Activin receptor type-1 2.7.11.30 0.668
3cbl STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.662
2yn8 STUEphrin type-B receptor 4 2.7.10.1 0.657
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.657
3erk SB4Mitogen-activated protein kinase 1 2.7.11.24 0.652
1eyq NARChalcone--flavonone isomerase 1 5.5.1.6 0.651
5e8w STUTGF-beta receptor type-1 2.7.11.30 0.651
2ym4 4YMSerine/threonine-protein kinase Chk1 2.7.11.1 0.650