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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3bi6 396 Wee1-like protein kinase 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3bi6 396Wee1-like protein kinase 2.7.10.2 1.131
3biz 61EWee1-like protein kinase 2.7.10.2 0.975
2in6 839Wee1-like protein kinase 2.7.10.2 0.935
2z2w 770Wee1-like protein kinase 2.7.10.2 0.920
2io6 330Wee1-like protein kinase 2.7.10.2 0.889
3cqe P91Wee1-like protein kinase 2.7.10.2 0.879
3cr0 809Wee1-like protein kinase 2.7.10.2 0.848
1x8b 824Wee1-like protein kinase 2.7.10.2 0.838
2hy8 1STSerine/threonine-protein kinase PAK 1 2.7.11.1 0.732
3cd3 STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.724
2x7f 824TRAF2 and NCK-interacting protein kinase 2.7.11.1 0.710
3bkb STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.704
2j0j 4STFocal adhesion kinase 1 2.7.10.2 0.696
1q3d STUGlycogen synthase kinase-3 beta 2.7.11.26 0.694
5hes 032Mitogen-activated protein kinase kinase kinase 20 2.7.11.25 0.679
4fv9 E71Mitogen-activated protein kinase 1 2.7.11.24 0.677
3ckx STUSerine/threonine-protein kinase 24 2.7.11.1 0.670
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.668
1u59 STUTyrosine-protein kinase ZAP-70 2.7.10.2 0.663
1pkd UCNCyclin-dependent kinase 2 2.7.11.22 0.662
4c58 824Cyclin-G-associated kinase 2.7.11.1 0.662
2dq7 STUTyrosine-protein kinase Fyn 2.7.10.2 0.661
1qpd STUTyrosine-protein kinase Lck 2.7.10.2 0.653
2xyu Q9GEphrin type-A receptor 4 2.7.10.1 0.652