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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ylo TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ylo TESAndrogen receptor / 1.140
1t7f DHTAndrogen receptor / 1.021
2ylq TESAndrogen receptor / 0.999
4k7a DHTAndrogen receptor / 0.997
2am9 TESAndrogen receptor / 0.988
2yhd TESAndrogen receptor / 0.982
2z4j DHTAndrogen receptor / 0.973
2qpy DHTAndrogen receptor / 0.965
2q7j TESAndrogen receptor / 0.956
1t7m DHTAndrogen receptor / 0.952
1t76 DHTAndrogen receptor / 0.950
2ao6 R18Androgen receptor / 0.874
1xow R18Androgen receptor / 0.868
1gs4 ZK5Androgen receptor / 0.846
1e3g R18Androgen receptor / 0.821
2q7l TESAndrogen receptor / 0.813
2amb 17HAndrogen receptor / 0.810
1t7t DHTAndrogen receptor / 0.772
1t63 DHTAndrogen receptor / 0.764
2piv DHTAndrogen receptor / 0.759
1xq3 R18Androgen receptor / 0.747
2ama DHTAndrogen receptor / 0.733
2q7k TESAndrogen receptor / 0.728
1kdm DHTSex hormone-binding globulin / 0.727
2piu DHTAndrogen receptor / 0.722
1d2s DHTSex hormone-binding globulin / 0.721
1kdk DHTSex hormone-binding globulin / 0.721
4oea DHTAndrogen receptor / 0.719
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.715
2pkl DHTAndrogen receptor / 0.714
2piq DHTAndrogen receptor / 0.712
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.709
3zqt TESAndrogen receptor / 0.706
2pip DHTAndrogen receptor / 0.699
2ylp TESAndrogen receptor / 0.699
4e5l DBHPolymerase acidic protein / 0.698
3uzz TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.696
1t73 DHTAndrogen receptor / 0.694
1t74 DHTAndrogen receptor / 0.694
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.694
2pit DHTAndrogen receptor / 0.694
1t65 DHTAndrogen receptor / 0.684
1jtv TESEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.682
2pix DHTAndrogen receptor / 0.682
4ofr DHTAndrogen receptor / 0.680
2pio DHTAndrogen receptor / 0.679
4oez DHTAndrogen receptor / 0.679
4at2 ASDPossible succinate dehydrogenase / 0.676
4ofu DHTAndrogen receptor / 0.676
2mm3 CHOGastrotropin / 0.673
2q7i TESAndrogen receptor / 0.671
1t7r DHTAndrogen receptor / 0.670
1f5f DHTSex hormone-binding globulin / 0.669
3eqm ASDAromatase 1.14.14.14 0.669
4hlw TESAndrogen receptor / 0.668
1t79 DHTAndrogen receptor / 0.664
1qyx ASDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.663
2pir DHTAndrogen receptor / 0.663
2rlc CHDCholoylglycine hydrolase 3.5.1.24 0.663
4apu A2KProgesterone receptor / 0.663
2aax PDNMineralocorticoid receptor / 0.662
2aa7 1CAMineralocorticoid receptor / 0.661
1lhw ESMSex hormone-binding globulin / 0.660
4oey DHTAndrogen receptor / 0.658
1xj7 DHTAndrogen receptor / 0.657
2lba CHOFatty acid binding protein 6 / 0.657
3ov4 EQUSteroid Delta-isomerase 5.3.3.1 0.655
4c49 HCYCorticosteroid-binding globulin / 0.655
1t5z DHTAndrogen receptor / 0.654
3cmf PDN3-oxo-5-beta-steroid 4-dehydrogenase / 0.650