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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2yec XQ0 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2yec XQ0Heat shock protein HSP 90-alpha / 0.847
2ye9 2D4Heat shock protein HSP 90-alpha / 0.734
4efu EFUHeat shock protein HSP 90-alpha / 0.704
2brc CT5ATP-dependent molecular chaperone HSP82 / 0.692
2ye4 2FYHeat shock protein HSP 90-alpha / 0.680
3hek BD0Heat shock protein HSP 90-alpha / 0.676
3eko PYUHeat shock protein HSP 90-alpha / 0.669
4bqj XKLHeat shock protein HSP 90-alpha / 0.669
2bz5 AB4Heat shock protein HSP 90-alpha / 0.668
3hhu 819Heat shock protein HSP 90-alpha / 0.661
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.660
3k99 PFTHeat shock protein HSP 90-alpha / 0.660
4e5l DBHPolymerase acidic protein / 0.659
2ccu 2D9Heat shock protein HSP 90-alpha / 0.657
2xab VHDHeat shock protein HSP 90-alpha / 0.657
2bre KJ2ATP-dependent molecular chaperone HSP82 / 0.656
2iwx M1SATP-dependent molecular chaperone HSP82 / 0.654
2byi 2DDHeat shock protein HSP 90-alpha / 0.653
1yc4 43PHeat shock protein HSP 90-alpha / 0.652
2bsm BSMHeat shock protein HSP 90-alpha / 0.651
3k97 4CDHeat shock protein HSP 90-alpha / 0.650