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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2wtj WTJ Serine/threonine-protein kinase Chk2 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2wtj WTJSerine/threonine-protein kinase Chk2 2.7.11.1 0.945
4e5i 0N9Polymerase acidic protein / 0.744
4ccb OFGALK tyrosine kinase receptor 2.7.10.1 0.666
4cd0 AWJALK tyrosine kinase receptor 2.7.10.1 0.664
4e5f 0N7Polymerase acidic protein / 0.660
4bdi HAUSerine/threonine-protein kinase Chk2 2.7.11.1 0.655
3cd3 STUTyrosine-protein kinase Fes/Fps 2.7.10.2 0.652