Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2wi7 2KL Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2wi7 2KLHeat shock protein HSP 90-alpha / 1.042
3r4p FU7Heat shock protein HSP 90-alpha / 0.794
3rlp 3RPHeat shock protein HSP 90-alpha / 0.757
3r4o FU3Heat shock protein HSP 90-alpha / 0.749
2xhr C0PHeat shock protein HSP 90-alpha / 0.746
3peh IBDEndoplasmin homolog, putative / 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2wi6 ZZ6Heat shock protein HSP 90-alpha / 0.742
3rlq 3RQHeat shock protein HSP 90-alpha / 0.729
4fcq 2N6Heat shock protein HSP 90-alpha / 0.716
2qfo A13Heat shock protein HSP 90-alpha / 0.689
4fcr 0TMHeat shock protein HSP 90-alpha / 0.682
2qg0 A94Heat shock protein HSP 90-alpha / 0.680
2wi1 ZZ2Heat shock protein HSP 90-alpha / 0.679
3omu IBDHeat shock protein 83 / 0.671
3wha WHAHeat shock protein HSP 90-alpha / 0.669
4asg 814ATP-dependent molecular chaperone HSP82 / 0.668
3vha VHAHeat shock protein HSP 90-alpha / 0.667
3r4n FU5Heat shock protein HSP 90-alpha / 0.666
2wi4 ZZ4Heat shock protein HSP 90-alpha / 0.663
4e5f 0N7Polymerase acidic protein / 0.660