Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2vu3 | LZE | Cyclin-dependent kinase 2 | 2.7.11.22 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2vu3 | LZE | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.937 | |
2vtq | LZA | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.850 | |
2vtt | LZD | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.768 | |
1g7u | PEP | 2-dehydro-3-deoxyphosphooctonate aldolase | 2.5.1.55 | 0.744 | |
4e5i | 0N9 | Polymerase acidic protein | / | 0.744 | |
2vto | LZ8 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.689 | |
2vtp | LZ9 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.673 | |
3lfs | A07 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.662 | |
4e5f | 0N7 | Polymerase acidic protein | / | 0.660 | |
3wbl | PDY | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.659 | |
2vtn | LZ7 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.657 | |
3vf8 | 0JE | Tyrosine-protein kinase SYK | 2.7.10.2 | 0.653 |