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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pnu ENM Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pnu ENMAndrogen receptor / 1.426
2pio DHTAndrogen receptor / 0.973
2ama DHTAndrogen receptor / 0.950
1t63 DHTAndrogen receptor / 0.941
2pip DHTAndrogen receptor / 0.938
1t79 DHTAndrogen receptor / 0.936
2piv DHTAndrogen receptor / 0.934
1t7r DHTAndrogen receptor / 0.932
1t74 DHTAndrogen receptor / 0.931
4oez DHTAndrogen receptor / 0.928
1t7f DHTAndrogen receptor / 0.927
1t5z DHTAndrogen receptor / 0.926
4oed DHTAndrogen receptor / 0.921
2piu DHTAndrogen receptor / 0.917
4oey DHTAndrogen receptor / 0.899
2pix DHTAndrogen receptor / 0.897
4ofr DHTAndrogen receptor / 0.896
1t73 DHTAndrogen receptor / 0.885
2piq DHTAndrogen receptor / 0.879
4oea DHTAndrogen receptor / 0.871
1t65 DHTAndrogen receptor / 0.868
2pkl DHTAndrogen receptor / 0.855
2z4j DHTAndrogen receptor / 0.843
1t7m DHTAndrogen receptor / 0.840
2piw DHTAndrogen receptor / 0.839
2q7i TESAndrogen receptor / 0.822
2pir DHTAndrogen receptor / 0.815
2ylp TESAndrogen receptor / 0.812
2pit DHTAndrogen receptor / 0.806
1xj7 DHTAndrogen receptor / 0.779
2q7l TESAndrogen receptor / 0.778
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1kdm DHTSex hormone-binding globulin / 0.740
5dx3 ESTEstrogen receptor / 0.725
1gs4 ZK5Androgen receptor / 0.714
1gwr ESTEstrogen receptor / 0.711
4e5l DBHPolymerase acidic protein / 0.711
4pxm ESTEstrogen receptor / 0.707
2am9 TESAndrogen receptor / 0.706
5hyr ESTEstrogen receptor / 0.700
5dxg ESTEstrogen receptor / 0.696
1g50 ESTEstrogen receptor / 0.688
1xq3 R18Androgen receptor / 0.688
3w5q 3KLVitamin D3 receptor / 0.681
3l03 4OHEstrogen receptor / 0.679
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.679
2qo5 CHDFatty acid-binding protein 10-A, liver basic / 0.678
3s79 ASDAromatase 1.14.14.14 0.678
3w5r LOAVitamin D3 receptor / 0.678
1lke DOGBilin-binding protein / 0.677
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.676
3w5t LHPVitamin D3 receptor / 0.676
4q0a 4OAVitamin D3 receptor A / 0.675
1o1v TCHGastrotropin / 0.674
4bb2 STRCorticosteroid-binding globulin / 0.670
2j7x ESTEstrogen receptor beta / 0.662
1xu9 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1xf0 ASDAldo-keto reductase family 1 member C3 / 0.659
3sm8 FNKFAD-dependent catabolic D-arginine dehydrogenase DauA / 0.659
1lnm DTXBilin-binding protein / 0.656
4gut FADLysine-specific histone demethylase 1B 1 0.655
3m8c EQUSteroid Delta-isomerase 5.3.3.1 0.653
1t76 DHTAndrogen receptor / 0.652
5dq8 FLFTranscriptional enhancer factor TEF-4 / 0.651
2lba CHOFatty acid binding protein 6 / 0.650
3cot STR3-oxo-5-beta-steroid 4-dehydrogenase / 0.650
4hlw TESAndrogen receptor / 0.650