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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pdf ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pdf ZSTAldose reductase 1.1.1.21 1.288
2pd5 ZSTAldose reductase 1.1.1.21 1.111
2duz ZSTAldose reductase 1.1.1.21 1.000
2pdm ZSTAldose reductase 1.1.1.21 0.998
3mb9 ZSTAldose reductase 1.1.1.21 0.941
3m0i ZSTAldose reductase 1.1.1.21 0.883
2pdh 47DAldose reductase 1.1.1.21 0.881
3len ZSTAldose reductase 1.1.1.21 0.878
2dv0 ZSTAldose reductase 1.1.1.21 0.874
2pdi ZSTAldose reductase 1.1.1.21 0.870
2hvo ZSTAldose reductase 1.1.1.21 0.858
2hv5 ZSTAldose reductase 1.1.1.21 0.840
1t40 ID5Aldose reductase 1.1.1.21 0.839
2fz9 ZSTAldose reductase 1.1.1.21 0.833
2dux ZSTAldose reductase 1.1.1.21 0.825
2fz8 ZSTAldose reductase 1.1.1.21 0.812
2hvn ZSTAldose reductase 1.1.1.21 0.809
1frb ZSTAldose reductase-related protein 2 / 0.802
4gca 2X9Aldose reductase 1.1.1.21 0.795
2pdx ZSTAldose reductase 1.1.1.21 0.790
2pdj 393Aldose reductase 1.1.1.21 0.786
2pdn 47DAldose reductase 1.1.1.21 0.769
2pdb ZSTAldose reductase 1.1.1.21 0.762
3mc5 393Aldose reductase 1.1.1.21 0.740
2pdc 393Aldose reductase 1.1.1.21 0.737
2pdq 47DAldose reductase 1.1.1.21 0.727
2pzn 393Aldose reductase 1.1.1.21 0.726
2ikj 393Aldose reductase 1.1.1.21 0.722
2iki 388Aldose reductase 1.1.1.21 0.721
2pdg 47DAldose reductase 1.1.1.21 0.710
3m4h 388Aldose reductase 1.1.1.21 0.702
1t41 ID5Aldose reductase 1.1.1.21 0.700
3m64 393Aldose reductase 1.1.1.21 0.691
2nvc ITAAldose reductase 1.1.1.21 0.689
3g5e Q74Aldose reductase 1.1.1.21 0.685
3lql LDTAldose reductase 1.1.1.21 0.685
1z3n 3NAAldose reductase 1.1.1.21 0.676
2xht C0YHeat shock protein HSP 90-alpha / 0.659
4yu1 53NAldose reductase 1.1.1.21 0.659
3ghs LDTAldose reductase 1.1.1.21 0.656
1z89 62PAldose reductase 1.1.1.21 0.650
1zua TOLAldo-keto reductase family 1 member B10 1.1.1 0.650