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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2pd5 ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2pd5 ZSTAldose reductase 1.1.1.21 1.345
2hvo ZSTAldose reductase 1.1.1.21 1.152
2dux ZSTAldose reductase 1.1.1.21 1.146
3m0i ZSTAldose reductase 1.1.1.21 1.135
2pdf ZSTAldose reductase 1.1.1.21 1.111
2pdi ZSTAldose reductase 1.1.1.21 1.078
2pdm ZSTAldose reductase 1.1.1.21 1.060
3mb9 ZSTAldose reductase 1.1.1.21 1.053
2hvn ZSTAldose reductase 1.1.1.21 1.048
2dv0 ZSTAldose reductase 1.1.1.21 1.040
2pdb ZSTAldose reductase 1.1.1.21 0.962
2pdh 47DAldose reductase 1.1.1.21 0.947
2pdx ZSTAldose reductase 1.1.1.21 0.945
3len ZSTAldose reductase 1.1.1.21 0.931
2hv5 ZSTAldose reductase 1.1.1.21 0.930
1z3n 3NAAldose reductase 1.1.1.21 0.927
4gca 2X9Aldose reductase 1.1.1.21 0.923
1frb ZSTAldose reductase-related protein 2 / 0.906
2pdn 47DAldose reductase 1.1.1.21 0.899
2fz8 ZSTAldose reductase 1.1.1.21 0.885
2duz ZSTAldose reductase 1.1.1.21 0.880
2fz9 ZSTAldose reductase 1.1.1.21 0.873
2pdq 47DAldose reductase 1.1.1.21 0.832
2pdg 47DAldose reductase 1.1.1.21 0.811
2pdp 393Aldose reductase 1.1.1.21 0.793
3g5e Q74Aldose reductase 1.1.1.21 0.777
2pdj 393Aldose reductase 1.1.1.21 0.752
3lql LDTAldose reductase 1.1.1.21 0.741
3m4h 388Aldose reductase 1.1.1.21 0.738
3m64 393Aldose reductase 1.1.1.21 0.734
2pzn 393Aldose reductase 1.1.1.21 0.728
2ikj 393Aldose reductase 1.1.1.21 0.727
2pdu 393Aldose reductase 1.1.1.21 0.722
3t42 3T4Aldose reductase 1.1.1.21 0.720
3mc5 393Aldose reductase 1.1.1.21 0.711
2pdc 393Aldose reductase 1.1.1.21 0.708
3ghu LDTAldose reductase 1.1.1.21 0.700
3lbo LDTAldose reductase 1.1.1.21 0.696
2nvc ITAAldose reductase 1.1.1.21 0.676
2inz OHPAldose reductase 1.1.1.21 0.650