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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2g6i HBI Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.813
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.780
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.779
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.778
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.778
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.778
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.778
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.778
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.778
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.775
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.773
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.771
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.765
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.764
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.763
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.761
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.761
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.761
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.761
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.760
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.760
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.760
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.760
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.760
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.759
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.759
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.759
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.759
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.759
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.759
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.759
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.758
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.758
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.758
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.757
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.757
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.757
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.756
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.756
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.756
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.756
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.756
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.755
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.755
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.753
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.753
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.753
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.753
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.751
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.751
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.751
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.750
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.747
4e5i 0N9Polymerase acidic protein / 0.744
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.742
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.742
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.741
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.741
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.740
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.739
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.738
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.738
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.737
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.735
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.735
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.734
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.734
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.733
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.732
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.732
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.732
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.732
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.728
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.725
3png H4BNitric oxide synthase, brain 1.14.13.39 0.725
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.725
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.724
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.724
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.724
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.724
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.723
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.722
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.720
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.720
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.720
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.719
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.716
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.716
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.714
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.713
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.712
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.706
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.705
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.704
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.698
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.697
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.687
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.686
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.684
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.683
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.682
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.682
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.681
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.674
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.666
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.665
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.664
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.661
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1qom H4BNitric oxide synthase, inducible 1.14.13.39 0.657
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.656
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.656
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.652
2nod H4BNitric oxide synthase, inducible 1.14.13.39 0.651
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.651