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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2bt0 CT5 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2bt0 CT5Heat shock protein HSP 90-alpha / 1.027
1yc3 4BCHeat shock protein HSP 90-alpha / 0.866
2yi6 6QMHeat shock protein HSP 90-alpha / 0.835
1yc1 4BCHeat shock protein HSP 90-alpha / 0.800
3hhu 819Heat shock protein HSP 90-alpha / 0.794
3k97 4CDHeat shock protein HSP 90-alpha / 0.789
2yjw YJWHeat shock protein HSP 90-alpha / 0.771
2ye9 2D4Heat shock protein HSP 90-alpha / 0.767
4egk RDCHeat shock protein HSP 90-alpha / 0.765
3inw JZBHeat shock protein HSP 90-alpha / 0.764
2byi 2DDHeat shock protein HSP 90-alpha / 0.756
3k98 1RCHeat shock protein HSP 90-alpha / 0.747
3ekr PY9Heat shock protein HSP 90-alpha / 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1yc4 43PHeat shock protein HSP 90-alpha / 0.741
2xab VHDHeat shock protein HSP 90-alpha / 0.739
2xjj L81Heat shock protein HSP 90-alpha / 0.738
2xjx XJXHeat shock protein HSP 90-alpha / 0.735
1qy8 RDIEndoplasmin / 0.732
2brc CT5ATP-dependent molecular chaperone HSP82 / 0.730
2xjg XJGHeat shock protein HSP 90-alpha / 0.725
4egh 0OYHeat shock protein HSP 90-alpha / 0.724
2xht C0YHeat shock protein HSP 90-alpha / 0.719
2vcj 2EQHeat shock protein HSP 90-alpha / 0.702
2xd6 XD6ATP-dependent molecular chaperone HSP82 / 0.690
2yk2 YJWHeat shock protein HSP 90-alpha / 0.689
4ce2 BO5ATP-dependent molecular chaperone HSP82 / 0.688
1u0z RDCEndoplasmin / 0.669
2xx2 13CATP-dependent molecular chaperone HSP82 / 0.669
3hek BD0Heat shock protein HSP 90-alpha / 0.663
4e5f 0N7Polymerase acidic protein / 0.660
2vci 2GJHeat shock protein HSP 90-alpha / 0.659
3qqh X0ACyclin-dependent kinase 2 2.7.11.22 0.652