sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2aa2 | AS4 | Mineralocorticoid receptor |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2aa2 | AS4 | Mineralocorticoid receptor | / | 1.210 | |
| 2aa7 | 1CA | Mineralocorticoid receptor | / | 1.079 | |
| 2aax | PDN | Mineralocorticoid receptor | / | 0.980 | |
| 2abi | 1CA | Mineralocorticoid receptor | / | 0.957 | |
| 3vhu | SNL | Mineralocorticoid receptor | / | 0.948 | |
| 2ab2 | SNL | Mineralocorticoid receptor | / | 0.923 | |
| 4uda | DEX | Mineralocorticoid receptor | / | 0.884 | |
| 1y9r | 1CA | Mineralocorticoid receptor | / | 0.843 | |
| 4udc | DEX | Glucocorticoid receptor | / | 0.816 | |
| 4a2j | AS0 | Progesterone receptor | / | 0.772 | |
| 2w8y | 486 | Progesterone receptor | / | 0.768 | |
| 1sr7 | MOF | Progesterone receptor | / | 0.760 | |
| 3mne | DEX | Glucocorticoid receptor | / | 0.753 | |
| 2w8y | NDR | Progesterone receptor | / | 0.749 | |
| 2oax | SNL | Mineralocorticoid receptor | / | 0.711 | |
| 4j26 | EST | Estrogen receptor beta | / | 0.706 | |
| 2ovh | AS0 | Progesterone receptor | / | 0.687 | |
| 1gs4 | ZK5 | Androgen receptor | / | 0.684 | |
| 2aa6 | STR | Mineralocorticoid receptor | / | 0.684 | |
| 4q0a | 4OA | Vitamin D3 receptor A | / | 0.680 | |
| 2piu | DHT | Androgen receptor | / | 0.675 | |
| 4j6d | TES | Cytochrome P450 monooxygenase | / | 0.674 | |
| 2aa5 | STR | Mineralocorticoid receptor | / | 0.673 | |
| 4dvq | 1CA | Cytochrome P450 11B2, mitochondrial | 1.14.15.4 | 0.668 | |
| 4hlw | TES | Androgen receptor | / | 0.662 | |
| 1xf0 | ASD | Aldo-keto reductase family 1 member C3 | / | 0.660 | |
| 2a3i | C0R | Mineralocorticoid receptor | / | 0.659 | |
| 3w1w | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.659 | |
| 2ovm | AS0 | Progesterone receptor | / | 0.657 | |
| 5epo | TUD | 7-alpha-hydroxysteroid deydrogenase | / | 0.657 | |
| 2mm3 | CHO | Gastrotropin | / | 0.654 | |
| 2yhd | TES | Androgen receptor | / | 0.654 | |
| 3q95 | ESL | Estrogen receptor | / | 0.654 | |
| 4p6w | MOF | Glucocorticoid receptor | / | 0.654 | |
| 3f3y | 4OA | Bile salt sulfotransferase | 2.8.2.14 | 0.651 |