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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1zzr H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.918
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.913
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.911
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.910
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.910
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.910
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.909
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.909
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.909
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.909
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.906
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.906
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.904
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.903
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.903
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.903
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.903
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.902
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.900
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.893
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.892
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.892
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.892
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.891
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.890
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.889
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.888
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.886
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.886
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.886
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.885
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.882
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.876
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.874
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.873
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.871
3png H4BNitric oxide synthase, brain 1.14.13.39 0.871
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.870
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.870
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.869
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.868
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.868
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.866
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.863
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.861
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.858
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.848
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.847
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.846
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.843
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.837
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.824
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.822
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.822
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.821
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.807
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.804
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.800
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.800
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.793
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.790
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.783
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.763
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.738
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.727
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.722
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.716
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.716
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.713
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.704
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.685
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.678
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.663
4e5f 0N7Polymerase acidic protein / 0.660
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.659
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.656
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.655
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.650