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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1yqj 6NP Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1yqj 6NPMitogen-activated protein kinase 14 / 1.121
4f9w LM4Mitogen-activated protein kinase 14 / 0.857
1bl6 SB6Mitogen-activated protein kinase 14 / 0.702
1ouk 084Mitogen-activated protein kinase 14 / 0.696
3fls FLSMitogen-activated protein kinase 14 / 0.696
2ewa SB2Mitogen-activated protein kinase 14 / 0.670
3flq 891Mitogen-activated protein kinase 14 / 0.670
3flw FLWMitogen-activated protein kinase 14 / 0.665
3fkn FKNMitogen-activated protein kinase 14 / 0.664
3fln 3FNMitogen-activated protein kinase 14 / 0.660
3tti KBIMitogen-activated protein kinase 10 2.7.11.24 0.658
3fml FMLMitogen-activated protein kinase 14 / 0.656
1bl7 SB4Mitogen-activated protein kinase 14 / 0.654
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.650