Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1ydt IQB cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1ydt IQBcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.983
3vqh IQBcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.794
2jdt I5ScAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.753
1xh6 R94cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.749
1sve I01cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.748
2c1a I5ScAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1xh5 R68cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.739
1svh I08cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.726
2f7e 2EAcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.724
1xh8 R55cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.714
1q8w M77cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.713
1q8u H52cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.712
2f2u M77Rho-associated protein kinase 2 2.7.11.1 0.712
1ydr IQPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.701
1xh4 R69cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.696
2gnl H52cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.690
2gni M77cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.686
3tku M77Serine/threonine-protein kinase MRCK beta 2.7.11.1 0.686
1svg I04cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.677
3l9m L9McAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.668
3oog YTPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.662
3v8s 0HDRho-associated protein kinase 1 2.7.11.1 0.662
4e5f 0N7Polymerase acidic protein / 0.660
2gnh H52cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.659
2nry STUInterleukin-1 receptor-associated kinase 4 2.7.11.1 0.659
1xha R68cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.658
2hxl 422Serine/threonine-protein kinase Chk1 2.7.11.1 0.657
1rek B8LcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.656
1p2a 5BNCyclin-dependent kinase 2 2.7.11.22 0.653