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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1xq3 R18 Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1xq3 R18Androgen receptor / 1.146
2ao6 R18Androgen receptor / 1.024
1xow R18Androgen receptor / 1.013
2amb 17HAndrogen receptor / 0.964
1e3g R18Androgen receptor / 0.916
2ylp TESAndrogen receptor / 0.892
4oey DHTAndrogen receptor / 0.892
2q7i TESAndrogen receptor / 0.881
2q7j TESAndrogen receptor / 0.846
2q7k TESAndrogen receptor / 0.842
4hlw TESAndrogen receptor / 0.838
1t74 DHTAndrogen receptor / 0.800
2am9 TESAndrogen receptor / 0.796
2piq DHTAndrogen receptor / 0.796
2qpy DHTAndrogen receptor / 0.796
1t7r DHTAndrogen receptor / 0.789
1t76 DHTAndrogen receptor / 0.787
2piv DHTAndrogen receptor / 0.787
1t7t DHTAndrogen receptor / 0.784
4oed DHTAndrogen receptor / 0.780
1t79 DHTAndrogen receptor / 0.772
3zqt TESAndrogen receptor / 0.767
4ofu DHTAndrogen receptor / 0.765
1t73 DHTAndrogen receptor / 0.756
4oez DHTAndrogen receptor / 0.754
1t7f DHTAndrogen receptor / 0.753
2pip DHTAndrogen receptor / 0.752
2ama DHTAndrogen receptor / 0.749
2ylo TESAndrogen receptor / 0.747
1t63 DHTAndrogen receptor / 0.745
1e3k R18Progesterone receptor / 0.737
1t5z DHTAndrogen receptor / 0.737
2pio DHTAndrogen receptor / 0.736
2pir DHTAndrogen receptor / 0.733
2piu DHTAndrogen receptor / 0.732
2pit DHTAndrogen receptor / 0.727
2z4j DHTAndrogen receptor / 0.723
2yhd TESAndrogen receptor / 0.714
2w8y NDRProgesterone receptor / 0.710
2j7x ESTEstrogen receptor beta / 0.701
2q7l TESAndrogen receptor / 0.701
4oea DHTAndrogen receptor / 0.696
2pnu ENMAndrogen receptor / 0.688
4e5l DBHPolymerase acidic protein / 0.675
5hyr ESTEstrogen receptor / 0.670
2ylq TESAndrogen receptor / 0.669
3uzx AOX3-oxo-5-beta-steroid 4-dehydrogenase / 0.665
4pxm ESTEstrogen receptor / 0.663
1sqn NDRProgesterone receptor / 0.659
3vhu SNLMineralocorticoid receptor / 0.650