Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1rsz DIH Purine nucleoside phosphorylase 2.4.2.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1rsz DIHPurine nucleoside phosphorylase 2.4.2.1 0.845
2a0w DIHPurine nucleoside phosphorylase 2.4.2.1 0.784
2a0y DIHPurine nucleoside phosphorylase 2.4.2.1 0.770
2a0x DIHPurine nucleoside phosphorylase 2.4.2.1 0.765
1rr6 IMHPurine nucleoside phosphorylase 2.4.2.1 0.754
2p4s DIHAGAP005945-PA / 0.725
1rt9 IMHPurine nucleoside phosphorylase 2.4.2.1 0.721
4ear IM5Purine nucleoside phosphorylase 2.4.2.1 0.716
3k8q 22APurine nucleoside phosphorylase 2.4.2.1 0.715
3bgs DIHPurine nucleoside phosphorylase 2.4.2.1 0.709
2oc9 IMHPurine nucleoside phosphorylase 2.4.2.1 0.698
2oc4 IMHPurine nucleoside phosphorylase 2.4.2.1 0.672
3k8o 229Purine nucleoside phosphorylase 2.4.2.1 0.669
1a9p 9DIPurine nucleoside phosphorylase 2.4.2.1 0.665
2q7o IMHPurine nucleoside phosphorylase 2.4.2.1 0.662
1a9s NOSPurine nucleoside phosphorylase 2.4.2.1 0.656