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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1pgt GTX Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1pgt GTXGlutathione S-transferase P 2.5.1.18 1.270
1aqv 0HGGlutathione S-transferase P 2.5.1.18 1.114
2glr GTXGlutathione S-transferase P 1 2.5.1.18 1.070
2oad GTBGlutathione S-transferase P 1 2.5.1.18 1.060
2pgt GPRGlutathione S-transferase P 2.5.1.18 1.055
2a2s GSNGlutathione S-transferase P 2.5.1.18 1.052
17gs GTXGlutathione S-transferase P 2.5.1.18 1.040
2oac GTBGlutathione S-transferase P 1 2.5.1.18 1.024
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 1.014
9gss GTXGlutathione S-transferase P 2.5.1.18 0.977
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.962
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.952
12gs 0HHGlutathione S-transferase P 2.5.1.18 0.949
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.914
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.879
4gss GTXGlutathione S-transferase P 2.5.1.18 0.877
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.855
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.838
1gss LEEGlutathione S-transferase P 2.5.1.18 0.812
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.758
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.756
2gsq GBIGlutathione S-transferase 2.5.1.18 0.743
3frc 0HGGlutathione S-transferase 2.5.1.18 0.738
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.722
2aaw GTXGlutathione S-transferase 2.5.1.18 0.716
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 0.712
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.709
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.698
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.697
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.696
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.685
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.679
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.673
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.672
5agy GTBTau class glutathione S-transferase / 0.669
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.667
3g7j GTXGlutathione transferase GST1-4 / 0.662
1sxj ADPReplication factor C subunit 5 / 0.661
2oa7 GTXGlutathione S-transferase P 1 2.5.1.18 0.661
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.651