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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1p6j H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.933
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.926
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.926
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.926
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.925
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.925
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.924
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.923
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.923
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.922
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.910
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.909
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.909
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.908
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.908
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.906
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.906
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.902
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.900
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.896
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.892
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.891
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.889
3png H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.887
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.887
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.886
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.886
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.885
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.885
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.884
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.883
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.880
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.879
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.878
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.875
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.875
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.874
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.872
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.870
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.865
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.865
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.859
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.859
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.858
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.857
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.857
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.855
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.854
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.854
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.851
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.851
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.851
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.849
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.841
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.841
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.839
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.837
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.833
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.826
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.821
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.800
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.798
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.795
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.775
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.764
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.755
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.746
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.744
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.724
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.715
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.705
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.702
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.700
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.696
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.685
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.676
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.662
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.659
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.653
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.653
2nod H4BNitric oxide synthase, inducible 1.14.13.39 0.650
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.650