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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1om5 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.860
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.844
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.840
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.838
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.838
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.836
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.836
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.835
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.834
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.834
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.833
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.832
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.830
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.829
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.828
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.828
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.826
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.825
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.825
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.825
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.824
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.824
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.824
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.823
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.823
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.823
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.822
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.822
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.822
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.822
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.822
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.821
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.820
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.820
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.820
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.819
3png H4BNitric oxide synthase, brain 1.14.13.39 0.818
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.818
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.818
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.816
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.816
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.816
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.816
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.816
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.816
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.815
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.815
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.815
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.814
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.813
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.813
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.810
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.808
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.808
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.808
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.807
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.807
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.807
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.806
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.805
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.805
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.802
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.802
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.799
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.795
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.793
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.791
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.790
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.788
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.786
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.786
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.785
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.785
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.784
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.784
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.784
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.784
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.784
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.783
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.782
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.778
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.777
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.776
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.776
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.775
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.775
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.774
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.769
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.769
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.767
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.765
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.764
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.756
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.748
4e5i 0N9Polymerase acidic protein / 0.744
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.735
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.727
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.724
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.724
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.718
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.718
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.717
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.714
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.703
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.703
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.688
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.686
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.672
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.671
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.671
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.664
4e5f 0N7Polymerase acidic protein / 0.660
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.657
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.653