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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1k3l GTX Glutathione S-transferase A1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1k3l GTXGlutathione S-transferase A1 2.5.1.18 1.307
1k3y GTXGlutathione S-transferase A1 2.5.1.18 1.175
3ktl GTXGlutathione S-transferase A1 2.5.1.18 1.095
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.980
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.918
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.911
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.900
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.882
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.874
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.841
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.801
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.801
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.795
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.795
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.789
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.754
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.753
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.744
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.743
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.735
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.730
2aaw GTXGlutathione S-transferase 2.5.1.18 0.726
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.724
3f63 GTXGlutathione transferase GST1-4 / 0.710
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.709
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.708
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.703
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.702
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.696
3frc 0HGGlutathione S-transferase 2.5.1.18 0.695
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.693
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.683
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.680
1gwc GTXGlutathione S-transferase 1 / 0.678
1k0c GTBTranscriptional regulator URE2 / 0.673
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.670
1k0a GTXTranscriptional regulator URE2 / 0.666
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.665
1hb3 SCVIsopenicillin N synthase 1.21.3.1 0.663
1gss LEEGlutathione S-transferase P 2.5.1.18 0.661
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.658
2gsq GBIGlutathione S-transferase 2.5.1.18 0.653
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.652
4iji 99TGlutathione S-transferase-like protein YibF / 0.651