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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1k2t H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.904
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.894
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.880
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.879
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.878
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.878
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.878
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.878
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.877
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.877
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.876
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.876
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.876
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.876
3png H4BNitric oxide synthase, brain 1.14.13.39 0.876
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.876
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.876
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.876
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.875
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.875
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.875
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.874
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.874
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.874
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.874
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.873
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.873
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.873
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.873
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.872
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.872
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.872
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.871
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.871
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.870
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.869
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.863
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.863
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.862
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.859
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.859
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.858
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.856
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.854
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.853
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.853
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.852
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.850
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.849
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.847
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.844
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.841
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.840
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.840
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.840
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.839
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.838
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.836
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.829
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.824
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.812
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.807
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.807
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.806
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.801
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.798
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.791
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.784
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.780
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.777
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.776
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.774
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.770
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.766
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.762
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.755
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.753
4e5i 0N9Polymerase acidic protein / 0.744
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.743
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.741
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.741
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.734
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.727
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.724
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.718
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.717
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.705
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.702
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.690
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.684
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.665
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.662
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.660