2.300 Å
X-ray
2015-02-16
Name: | Soluble acetylcholine receptor |
---|---|
ID: | Q8WSF8_APLCA |
AC: | Q8WSF8 |
Organism: | Aplysia californica |
Reign: | Eukaryota |
TaxID: | 6500 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 53 % |
E | 47 % |
B-Factor: | 46.513 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 19 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.891 | 1026.000 |
% Hydrophobic | % Polar |
---|---|
37.50 | 62.50 |
According to VolSite |
HET Code: | QMR |
---|---|
Formula: | C13H14N3 |
Molecular weight: | 212.270 g/mol |
DrugBank ID: | DB01273 |
Buried Surface Area: | 76.48 % |
Polar Surface area: | 42.39 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 4 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
-2.00293 | -29.0239 | -44.5907 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N02 | OH | TYR- 91 | 2.69 | 166.88 | H-Bond (Ligand Donor) |
C15 | CB | ILE- 116 | 3.68 | 0 | Hydrophobic |
C16 | CD1 | ILE- 116 | 4.29 | 0 | Hydrophobic |
N02 | O | TRP- 145 | 2.89 | 159.86 | H-Bond (Ligand Donor) |
C04 | CZ2 | TRP- 145 | 3.88 | 0 | Hydrophobic |
C05 | CD2 | TYR- 186 | 4.12 | 0 | Hydrophobic |
C06 | CG | TYR- 186 | 3.7 | 0 | Hydrophobic |
C06 | SG | CYS- 188 | 3.67 | 0 | Hydrophobic |
C08 | SG | CYS- 189 | 3.49 | 0 | Hydrophobic |
N13 | O | HOH- 2072 | 3.13 | 166.33 | H-Bond (Protein Donor) |