1.980 Å
X-ray
2014-04-24
| Name: | Uncharacterized protein |
|---|---|
| ID: | Q2G1L5_STAA8 |
| AC: | Q2G1L5 |
| Organism: | Staphylococcus aureus |
| Reign: | Bacteria |
| TaxID: | 93061 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 24.213 |
|---|---|
| Number of residues: | 31 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | MG MN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.695 | 1161.000 |
| % Hydrophobic | % Polar |
|---|---|
| 40.99 | 59.01 |
| According to VolSite | |

| HET Code: | 3D1 |
|---|---|
| Formula: | C10H13N5O3 |
| Molecular weight: | 251.242 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 64.23 % |
| Polar Surface area: | 119.31 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| -46.9247 | 43.4983 | 110.324 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O3' | NE2 | HIS- 94 | 2.8 | 150.87 | H-Bond (Ligand Donor) |
| C5' | CE2 | TRP- 154 | 3.83 | 0 | Hydrophobic |
| C1' | CE1 | PHE- 370 | 4.33 | 0 | Hydrophobic |
| DuAr | DuAr | PHE- 370 | 3.67 | 0 | Aromatic Face/Face |
| N1 | ND2 | ASN- 372 | 2.77 | 167.74 | H-Bond (Protein Donor) |
| N6 | OD1 | ASN- 372 | 2.9 | 146.97 | H-Bond (Ligand Donor) |
| C2' | CZ | PHE- 416 | 4.11 | 0 | Hydrophobic |
| C5' | CZ | TYR- 461 | 4.08 | 0 | Hydrophobic |
| C1' | CE1 | TYR- 461 | 4.14 | 0 | Hydrophobic |
| DuAr | DuAr | TYR- 461 | 3.74 | 0 | Aromatic Face/Face |
| N7 | O | HOH- 843 | 2.72 | 163.66 | H-Bond (Protein Donor) |