1.980 Å
X-ray
2014-04-24
Name: | Uncharacterized protein |
---|---|
ID: | Q2G1L5_STAA8 |
AC: | Q2G1L5 |
Organism: | Staphylococcus aureus |
Reign: | Bacteria |
TaxID: | 93061 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 24.213 |
---|---|
Number of residues: | 31 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 2 |
Water Molecules: | 2 |
Cofactors: | |
Metals: | MG MN |
Ligandability | Volume (Å3) |
---|---|
0.695 | 1161.000 |
% Hydrophobic | % Polar |
---|---|
40.99 | 59.01 |
According to VolSite |
HET Code: | 3D1 |
---|---|
Formula: | C10H13N5O3 |
Molecular weight: | 251.242 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 64.23 % |
Polar Surface area: | 119.31 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-46.9247 | 43.4983 | 110.324 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O3' | NE2 | HIS- 94 | 2.8 | 150.87 | H-Bond (Ligand Donor) |
C5' | CE2 | TRP- 154 | 3.83 | 0 | Hydrophobic |
C1' | CE1 | PHE- 370 | 4.33 | 0 | Hydrophobic |
DuAr | DuAr | PHE- 370 | 3.67 | 0 | Aromatic Face/Face |
N1 | ND2 | ASN- 372 | 2.77 | 167.74 | H-Bond (Protein Donor) |
N6 | OD1 | ASN- 372 | 2.9 | 146.97 | H-Bond (Ligand Donor) |
C2' | CZ | PHE- 416 | 4.11 | 0 | Hydrophobic |
C5' | CZ | TYR- 461 | 4.08 | 0 | Hydrophobic |
C1' | CE1 | TYR- 461 | 4.14 | 0 | Hydrophobic |
DuAr | DuAr | TYR- 461 | 3.74 | 0 | Aromatic Face/Face |
N7 | O | HOH- 843 | 2.72 | 163.66 | H-Bond (Protein Donor) |