1.480 Å
X-ray
2012-04-25
Name: | Succinyl-CoA:acetate CoA-transferase |
---|---|
ID: | SCACT_ACEAC |
AC: | B3EY95 |
Organism: | Acetobacter aceti |
Reign: | Bacteria |
TaxID: | 435 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 9.560 |
---|---|
Number of residues: | 55 |
Including | |
Standard Amino Acids: | 48 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 7 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.109 | 637.875 |
% Hydrophobic | % Polar |
---|---|
40.74 | 59.26 |
According to VolSite |
HET Code: | COA |
---|---|
Formula: | C21H32N7O16P3S |
Molecular weight: | 763.502 g/mol |
DrugBank ID: | DB01992 |
Buried Surface Area: | 45.34 % |
Polar Surface area: | 426.11 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 21 |
H-Bond Donors: | 6 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 3 |
Rotatable Bonds: | 18 |
X | Y | Z |
---|---|---|
-6.52546 | 13.7053 | -26.0122 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6P | CE1 | PHE- 92 | 3.73 | 0 | Hydrophobic |
C2P | CG | GLU- 294 | 4.46 | 0 | Hydrophobic |
N6A | O | ILE- 364 | 2.75 | 137.03 | H-Bond (Ligand Donor) |
C1B | CD1 | ILE- 364 | 4.44 | 0 | Hydrophobic |
CDP | CD1 | ILE- 364 | 4.03 | 0 | Hydrophobic |
CEP | CD1 | ILE- 364 | 3.94 | 0 | Hydrophobic |
C1B | CE | MET- 383 | 3.91 | 0 | Hydrophobic |
C4B | CE | MET- 383 | 3.95 | 0 | Hydrophobic |
CEP | CG | MET- 383 | 3.7 | 0 | Hydrophobic |
O9P | ND2 | ASN- 384 | 2.87 | 166.04 | H-Bond (Protein Donor) |
N4P | O | HOH- 518 | 2.75 | 163.92 | H-Bond (Ligand Donor) |
O9P | O | HOH- 535 | 2.75 | 140.85 | H-Bond (Protein Donor) |
N6A | O | HOH- 566 | 2.98 | 163.49 | H-Bond (Ligand Donor) |
O5A | O | HOH- 582 | 3.41 | 179.97 | H-Bond (Protein Donor) |
O5P | O | HOH- 748 | 2.76 | 148.18 | H-Bond (Protein Donor) |