2.800 Å
X-ray
2013-04-10
| Name: | Mitogen-activated protein kinase kinase kinase 5 |
|---|---|
| ID: | M3K5_HUMAN |
| AC: | Q99683 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 2.7.11.25 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 70.378 |
|---|---|
| Number of residues: | 33 |
| Including | |
| Standard Amino Acids: | 33 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.409 | 864.000 |
| % Hydrophobic | % Polar |
|---|---|
| 56.64 | 43.36 |
| According to VolSite | |

| HET Code: | IE8 |
|---|---|
| Formula: | C24H21N4O2 |
| Molecular weight: | 397.449 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 71.76 % |
| Polar Surface area: | 91.58 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 3 |
| H-Bond Donors: | 2 |
| Rings: | 5 |
| Aromatic rings: | 5 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -49.4242 | 12.5597 | -7.3576 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C15 | CD1 | LEU- 686 | 3.88 | 0 | Hydrophobic |
| C21 | CB | LEU- 686 | 3.93 | 0 | Hydrophobic |
| C9 | CG2 | VAL- 694 | 4.05 | 0 | Hydrophobic |
| C17 | CG1 | VAL- 694 | 4.26 | 0 | Hydrophobic |
| C19 | CG2 | VAL- 694 | 3.78 | 0 | Hydrophobic |
| C17 | CB | ALA- 707 | 4.03 | 0 | Hydrophobic |
| N2 | O | GLU- 755 | 2.87 | 158.28 | H-Bond (Ligand Donor) |
| N3 | N | VAL- 757 | 3.13 | 166.99 | H-Bond (Protein Donor) |
| C17 | CD1 | LEU- 810 | 3.47 | 0 | Hydrophobic |
| C23 | CD2 | LEU- 810 | 3.46 | 0 | Hydrophobic |
| C10 | CB | SER- 821 | 4.08 | 0 | Hydrophobic |
| N | OD2 | ASP- 822 | 3.87 | 0 | Ionic (Ligand Cationic) |
| C2 | CB | ASP- 822 | 4.42 | 0 | Hydrophobic |