1.600 Å
X-ray
2011-09-30
| Name: | Uncharacterized protein |
|---|---|
| ID: | Q9I012_PSEAE |
| AC: | Q9I012 |
| Organism: | Pseudomonas aeruginosa |
| Reign: | Bacteria |
| TaxID: | 208964 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 7.530 |
|---|---|
| Number of residues: | 29 |
| Including | |
| Standard Amino Acids: | 24 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 4 |
| Cofactors: | |
| Metals: | ZN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.253 | 354.375 |
| % Hydrophobic | % Polar |
|---|---|
| 45.71 | 54.29 |
| According to VolSite | |

| HET Code: | GEM |
|---|---|
| Formula: | C7H12N3O4S |
| Molecular weight: | 234.253 g/mol |
| DrugBank ID: | DB04489 |
| Buried Surface Area: | 59.89 % |
| Polar Surface area: | 169.2 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 3 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| -1.67047 | -7.59073 | 8.42913 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O15 | CZ | ARG- 218 | 3.55 | 0 | Ionic (Protein Cationic) |
| O13 | CZ | ARG- 218 | 3.84 | 0 | Ionic (Protein Cationic) |
| O15 | NH2 | ARG- 218 | 2.66 | 174.03 | H-Bond (Protein Donor) |
| O13 | NH1 | ARG- 218 | 2.99 | 140.75 | H-Bond (Protein Donor) |
| O14 | ND2 | ASN- 227 | 2.77 | 174.05 | H-Bond (Protein Donor) |
| O14 | NH1 | ARG- 228 | 3.01 | 174.92 | H-Bond (Protein Donor) |
| O15 | NH2 | ARG- 228 | 3 | 165.35 | H-Bond (Protein Donor) |
| O14 | CZ | ARG- 228 | 3.9 | 0 | Ionic (Protein Cationic) |
| O15 | CZ | ARG- 228 | 3.75 | 0 | Ionic (Protein Cationic) |
| C5 | CB | ALA- 271 | 4.36 | 0 | Hydrophobic |
| C5 | CE2 | TYR- 306 | 3.3 | 0 | Hydrophobic |
| C10 | CZ | TYR- 306 | 4 | 0 | Hydrophobic |
| C6 | CD2 | LEU- 318 | 4.08 | 0 | Hydrophobic |
| S7 | CG2 | THR- 333 | 3.29 | 0 | Hydrophobic |
| C6 | CB | THR- 333 | 3.45 | 0 | Hydrophobic |
| C5 | CG2 | THR- 333 | 4 | 0 | Hydrophobic |
| O12 | ZN | ZN- 1376 | 2.73 | 0 | Metal Acceptor |
| O13 | ZN | ZN- 1376 | 2.22 | 0 | Metal Acceptor |