1.560 Å
X-ray
2011-12-05
Name: | NADPH-dependent 7-cyano-7-deazaguanine reductase |
---|---|
ID: | QUEF_VIBCH |
AC: | Q9KTK0 |
Organism: | Vibrio cholerae serotype O1 |
Reign: | Bacteria |
TaxID: | 243277 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 26.548 |
---|---|
Number of residues: | 17 |
Including | |
Standard Amino Acids: | 15 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | NAP |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.764 | 384.750 |
% Hydrophobic | % Polar |
---|---|
57.89 | 42.11 |
According to VolSite |
HET Code: | GUN |
---|---|
Formula: | C5H5N5O |
Molecular weight: | 151.126 g/mol |
DrugBank ID: | DB02377 |
Buried Surface Area: | 72.18 % |
Polar Surface area: | 96.16 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
22.8104 | 31.9913 | -7.68018 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N2 | O | ILE- 93 | 2.81 | 161.27 | H-Bond (Ligand Donor) |
N3 | N | SER- 95 | 2.87 | 145.75 | H-Bond (Protein Donor) |
DuAr | DuAr | PHE- 232 | 3.81 | 0 | Aromatic Face/Face |
O6 | N | HIS- 233 | 2.66 | 156.88 | H-Bond (Protein Donor) |
N1 | OE1 | GLU- 234 | 2.83 | 150.04 | H-Bond (Ligand Donor) |
N2 | OE2 | GLU- 234 | 2.75 | 170.76 | H-Bond (Ligand Donor) |
N2 | OE1 | GLU- 234 | 3.44 | 129.01 | H-Bond (Ligand Donor) |