1.800 Å
X-ray
2009-11-10
| Name: | Disintegrin and metalloproteinase domain-containing protein 17 |
|---|---|
| ID: | ADA17_HUMAN |
| AC: | P78536 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 3.4.24.86 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 27.751 |
|---|---|
| Number of residues: | 28 |
| Including | |
| Standard Amino Acids: | 26 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | ZN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.060 | 361.125 |
| % Hydrophobic | % Polar |
|---|---|
| 38.32 | 61.68 |
| According to VolSite | |

| HET Code: | 403 |
|---|---|
| Formula: | C20H24ClN3O4S |
| Molecular weight: | 437.940 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 58.16 % |
| Polar Surface area: | 121.35 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 7 |
| X | Y | Z |
|---|---|---|
| 50.1772 | 33.3726 | 40.5691 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O10 | ZN | ZN- 2 | 2.45 | 0 | Metal Acceptor |
| O21 | ZN | ZN- 2 | 2.08 | 0 | Metal Acceptor |
| O22 | ZN | ZN- 2 | 2.34 | 0 | Metal Acceptor |
| O17 | N | LEU- 348 | 3.16 | 163.68 | H-Bond (Protein Donor) |
| C23 | CB | LEU- 348 | 3.95 | 0 | Hydrophobic |
| O17 | N | GLY- 349 | 3.3 | 148.76 | H-Bond (Protein Donor) |
| C23 | CG2 | VAL- 402 | 4.06 | 0 | Hydrophobic |
| DuAr | DuAr | HIS- 405 | 3.97 | 0 | Aromatic Face/Face |
| O21 | OE1 | GLU- 406 | 3.01 | 129.2 | H-Bond (Ligand Donor) |
| O21 | OE2 | GLU- 406 | 2.72 | 165.99 | H-Bond (Ligand Donor) |
| S8 | CB | ALA- 439 | 4.05 | 0 | Hydrophobic |
| C23 | CB | ALA- 439 | 3.9 | 0 | Hydrophobic |