1.800 Å
X-ray
2009-11-10
Name: | Disintegrin and metalloproteinase domain-containing protein 17 |
---|---|
ID: | ADA17_HUMAN |
AC: | P78536 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 3.4.24.86 |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 27.751 |
---|---|
Number of residues: | 28 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | |
Metals: | ZN |
Ligandability | Volume (Å3) |
---|---|
0.060 | 361.125 |
% Hydrophobic | % Polar |
---|---|
38.32 | 61.68 |
According to VolSite |
HET Code: | 403 |
---|---|
Formula: | C20H24ClN3O4S |
Molecular weight: | 437.940 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 58.16 % |
Polar Surface area: | 121.35 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
50.1772 | 33.3726 | 40.5691 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O10 | ZN | ZN- 2 | 2.45 | 0 | Metal Acceptor |
O21 | ZN | ZN- 2 | 2.08 | 0 | Metal Acceptor |
O22 | ZN | ZN- 2 | 2.34 | 0 | Metal Acceptor |
O17 | N | LEU- 348 | 3.16 | 163.68 | H-Bond (Protein Donor) |
C23 | CB | LEU- 348 | 3.95 | 0 | Hydrophobic |
O17 | N | GLY- 349 | 3.3 | 148.76 | H-Bond (Protein Donor) |
C23 | CG2 | VAL- 402 | 4.06 | 0 | Hydrophobic |
DuAr | DuAr | HIS- 405 | 3.97 | 0 | Aromatic Face/Face |
O21 | OE1 | GLU- 406 | 3.01 | 129.2 | H-Bond (Ligand Donor) |
O21 | OE2 | GLU- 406 | 2.72 | 165.99 | H-Bond (Ligand Donor) |
S8 | CB | ALA- 439 | 4.05 | 0 | Hydrophobic |
C23 | CB | ALA- 439 | 3.9 | 0 | Hydrophobic |