2.560 Å
X-ray
2008-05-08
Name: | Amino-acid acetyltransferase |
---|---|
ID: | Q5FAK7_NEIG1 |
AC: | Q5FAK7 |
Organism: | Neisseria gonorrhoeae |
Reign: | Bacteria |
TaxID: | 242231 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 28.930 |
---|---|
Number of residues: | 30 |
Including | |
Standard Amino Acids: | 30 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.186 | 1127.250 |
% Hydrophobic | % Polar |
---|---|
41.02 | 58.98 |
According to VolSite |
HET Code: | COA |
---|---|
Formula: | C21H32N7O16P3S |
Molecular weight: | 763.502 g/mol |
DrugBank ID: | DB01992 |
Buried Surface Area: | 44.21 % |
Polar Surface area: | 426.11 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 21 |
H-Bond Donors: | 6 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 3 |
Rotatable Bonds: | 18 |
X | Y | Z |
---|---|---|
-12.2739 | 59.9874 | 21.6623 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6P | CD1 | LEU- 307 | 3.33 | 0 | Hydrophobic |
CDP | CG | LEU- 357 | 4.19 | 0 | Hydrophobic |
S1P | CB | LEU- 357 | 3.95 | 0 | Hydrophobic |
CDP | CG2 | VAL- 359 | 3.88 | 0 | Hydrophobic |
CAP | CG | GLN- 364 | 4.42 | 0 | Hydrophobic |
O4A | N | ASP- 365 | 2.79 | 154.95 | H-Bond (Protein Donor) |
O2A | N | GLY- 367 | 3.04 | 158.29 | H-Bond (Protein Donor) |
O5A | N | GLY- 369 | 2.86 | 143.47 | H-Bond (Protein Donor) |
O1A | N | GLU- 370 | 3.05 | 154.14 | H-Bond (Protein Donor) |
N6A | O | ASN- 394 | 3.13 | 163.85 | H-Bond (Ligand Donor) |
CEP | CG2 | THR- 395 | 3.58 | 0 | Hydrophobic |
O5B | NE1 | TRP- 398 | 3.11 | 165.99 | H-Bond (Protein Donor) |
CCP | CZ2 | TRP- 398 | 3.8 | 0 | Hydrophobic |
CEP | CD2 | TRP- 398 | 4.29 | 0 | Hydrophobic |