2.700 Å
X-ray
2008-02-04
| Name: | Protein TRANSPORT INHIBITOR RESPONSE 1 |
|---|---|
| ID: | TIR1_ARATH |
| AC: | Q570C0 |
| Organism: | Arabidopsis thaliana |
| Reign: | Eukaryota |
| TaxID: | 3702 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 35.144 |
|---|---|
| Number of residues: | 26 |
| Including | |
| Standard Amino Acids: | 23 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.069 | 570.375 |
| % Hydrophobic | % Polar |
|---|---|
| 42.01 | 57.99 |
| According to VolSite | |

| HET Code: | 2S3 |
|---|---|
| Formula: | C13H14NO2 |
| Molecular weight: | 216.256 g/mol |
| DrugBank ID: | DB06981 |
| Buried Surface Area: | 72.75 % |
| Polar Surface area: | 55.92 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 2 |
| H-Bond Donors: | 1 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 4 |
| X | Y | Z |
|---|---|---|
| 17.5092 | 11.7484 | 34.3186 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CAQ | CZ | PHE- 82 | 4.3 | 0 | Hydrophobic |
| CAI | CD1 | LEU- 378 | 3.63 | 0 | Hydrophobic |
| CAI | CZ | PHE- 380 | 3.8 | 0 | Hydrophobic |
| OAC | CZ | ARG- 403 | 3.95 | 0 | Ionic (Protein Cationic) |
| OAB | CZ | ARG- 403 | 3.29 | 0 | Ionic (Protein Cationic) |
| OAB | NH2 | ARG- 403 | 3.32 | 120.96 | H-Bond (Protein Donor) |
| NL | O | LEU- 404 | 3.34 | 130.73 | H-Bond (Ligand Donor) |
| CAI | CB | CYS- 405 | 3.37 | 0 | Hydrophobic |
| OAC | NH2 | ARG- 436 | 3.31 | 164.91 | H-Bond (Protein Donor) |
| OAB | OG | SER- 438 | 2.8 | 152.36 | H-Bond (Protein Donor) |
| CAE | CB | SER- 462 | 3.65 | 0 | Hydrophobic |
| CAD | CB | ALA- 464 | 3.44 | 0 | Hydrophobic |