2.700 Å
X-ray
2008-02-04
Name: | Protein TRANSPORT INHIBITOR RESPONSE 1 |
---|---|
ID: | TIR1_ARATH |
AC: | Q570C0 |
Organism: | Arabidopsis thaliana |
Reign: | Eukaryota |
TaxID: | 3702 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 35.144 |
---|---|
Number of residues: | 26 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.069 | 570.375 |
% Hydrophobic | % Polar |
---|---|
42.01 | 57.99 |
According to VolSite |
HET Code: | 2S3 |
---|---|
Formula: | C13H14NO2 |
Molecular weight: | 216.256 g/mol |
DrugBank ID: | DB06981 |
Buried Surface Area: | 72.75 % |
Polar Surface area: | 55.92 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
17.5092 | 11.7484 | 34.3186 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAQ | CZ | PHE- 82 | 4.3 | 0 | Hydrophobic |
CAI | CD1 | LEU- 378 | 3.63 | 0 | Hydrophobic |
CAI | CZ | PHE- 380 | 3.8 | 0 | Hydrophobic |
OAC | CZ | ARG- 403 | 3.95 | 0 | Ionic (Protein Cationic) |
OAB | CZ | ARG- 403 | 3.29 | 0 | Ionic (Protein Cationic) |
OAB | NH2 | ARG- 403 | 3.32 | 120.96 | H-Bond (Protein Donor) |
NL | O | LEU- 404 | 3.34 | 130.73 | H-Bond (Ligand Donor) |
CAI | CB | CYS- 405 | 3.37 | 0 | Hydrophobic |
OAC | NH2 | ARG- 436 | 3.31 | 164.91 | H-Bond (Protein Donor) |
OAB | OG | SER- 438 | 2.8 | 152.36 | H-Bond (Protein Donor) |
CAE | CB | SER- 462 | 3.65 | 0 | Hydrophobic |
CAD | CB | ALA- 464 | 3.44 | 0 | Hydrophobic |