2.880 Å
X-ray
2008-04-16
Name: | Dual specificity protein kinase TTK |
---|---|
ID: | TTK_HUMAN |
AC: | P33981 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.12.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 59.837 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 21 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.402 | 624.375 |
% Hydrophobic | % Polar |
---|---|
64.32 | 35.68 |
According to VolSite |
HET Code: | 537 |
---|---|
Formula: | C14H8N2O |
Molecular weight: | 220.226 g/mol |
DrugBank ID: | DB01782 |
Buried Surface Area: | 56.05 % |
Polar Surface area: | 45.75 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 4 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
-36.2755 | -17.4406 | -11.5221 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C5 | CG2 | ILE- 531 | 3.25 | 0 | Hydrophobic |
C16 | CG1 | VAL- 539 | 3.99 | 0 | Hydrophobic |
C15 | CG1 | VAL- 539 | 4.11 | 0 | Hydrophobic |
C12 | CB | ALA- 551 | 3.56 | 0 | Hydrophobic |
C13 | CD1 | ILE- 586 | 3.42 | 0 | Hydrophobic |
C13 | CE | MET- 602 | 3.57 | 0 | Hydrophobic |
N24 | O | GLU- 603 | 2.82 | 154.06 | H-Bond (Ligand Donor) |
N23 | N | GLY- 605 | 2.91 | 138.59 | H-Bond (Protein Donor) |
C16 | CD1 | LEU- 654 | 4.25 | 0 | Hydrophobic |
C11 | CD2 | LEU- 654 | 3.85 | 0 | Hydrophobic |
C3 | CD1 | LEU- 654 | 3.23 | 0 | Hydrophobic |