2.800 Å
X-ray
2007-01-28
Min | Mean | Median | Standard Deviation | Max | Count | |
---|---|---|---|---|---|---|
pChEMBL: | 6.220 | 6.220 | 6.220 | 0.000 | 6.220 | 1 |
Name: | Phenylethanolamine N-methyltransferase |
---|---|
ID: | PNMT_HUMAN |
AC: | P11086 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.1.1.28 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 67.118 |
---|---|
Number of residues: | 34 |
Including | |
Standard Amino Acids: | 33 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.177 | 300.375 |
% Hydrophobic | % Polar |
---|---|
73.03 | 26.97 |
According to VolSite |
HET Code: | F21 |
---|---|
Formula: | C14H20FN2O2S2 |
Molecular weight: | 331.449 g/mol |
DrugBank ID: | DB07739 |
Buried Surface Area: | 80.28 % |
Polar Surface area: | 87.67 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
28.4166 | 44.7277 | 16.112 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C11 | CE1 | TYR- 35 | 4.43 | 0 | Hydrophobic |
C4 | CE1 | TYR- 35 | 3.67 | 0 | Hydrophobic |
C6 | CB | ASN- 39 | 3.96 | 0 | Hydrophobic |
C5 | CB | ASN- 39 | 3.97 | 0 | Hydrophobic |
S2 | CE2 | TYR- 40 | 3.33 | 0 | Hydrophobic |
C15 | CD2 | TYR- 40 | 3.83 | 0 | Hydrophobic |
C14 | CE2 | TYR- 40 | 3.86 | 0 | Hydrophobic |
C12 | CE2 | TYR- 40 | 4.34 | 0 | Hydrophobic |
C14 | CB | ARG- 44 | 4.28 | 0 | Hydrophobic |
C14 | CG1 | VAL- 53 | 4.08 | 0 | Hydrophobic |
C13 | CB | ALA- 57 | 3.8 | 0 | Hydrophobic |
C13 | CE1 | TYR- 85 | 4.03 | 0 | Hydrophobic |
S2 | CE2 | TYR- 126 | 4.06 | 0 | Hydrophobic |
C12 | CE1 | PHE- 182 | 3.7 | 0 | Hydrophobic |
C11 | CB | PHE- 182 | 4.49 | 0 | Hydrophobic |
C4 | CG | PHE- 182 | 3.89 | 0 | Hydrophobic |
DuAr | DuAr | PHE- 182 | 3.72 | 0 | Aromatic Face/Face |
F1 | CB | ALA- 186 | 3.89 | 0 | Hydrophobic |
N2 | OE1 | GLU- 219 | 2.96 | 141.1 | H-Bond (Ligand Donor) |
N2 | OE1 | GLU- 219 | 2.96 | 0 | Ionic (Ligand Cationic) |
N2 | OE2 | GLU- 219 | 3.61 | 0 | Ionic (Ligand Cationic) |
C11 | CG | TYR- 222 | 3.56 | 0 | Hydrophobic |
F1 | CD2 | TYR- 222 | 3.22 | 0 | Hydrophobic |
F1 | CG2 | VAL- 231 | 3.93 | 0 | Hydrophobic |
C8 | CE | MET- 258 | 4.43 | 0 | Hydrophobic |
N2 | OD2 | ASP- 267 | 3.46 | 0 | Ionic (Ligand Cationic) |