2.400 Å
X-ray
2006-11-29
| Name: | Endoplasmin |
|---|---|
| ID: | ENPL_CANLF |
| AC: | P41148 |
| Organism: | Canis lupus familiaris |
| Reign: | Eukaryota |
| TaxID: | 9615 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 32.175 |
|---|---|
| Number of residues: | 28 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.140 | 354.375 |
| % Hydrophobic | % Polar |
|---|---|
| 46.67 | 53.33 |
| According to VolSite | |

| HET Code: | ANP |
|---|---|
| Formula: | C10H13N6O12P3 |
| Molecular weight: | 502.164 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 45.11 % |
| Polar Surface area: | 322.68 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 16 |
| H-Bond Donors: | 4 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 2 |
| Rotatable Bonds: | 8 |
| X | Y | Z |
|---|---|---|
| 19.044 | 20.494 | 51.7645 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O1A | ND2 | ASN- 107 | 2.91 | 137.8 | H-Bond (Protein Donor) |
| N6 | OD1 | ASP- 149 | 2.88 | 169.32 | H-Bond (Ligand Donor) |
| C1' | SD | MET- 154 | 3.91 | 0 | Hydrophobic |
| C4' | CB | ASN- 162 | 4.09 | 0 | Hydrophobic |
| C1' | CB | ASN- 162 | 3.83 | 0 | Hydrophobic |
| C1' | CD2 | LEU- 163 | 4.4 | 0 | Hydrophobic |
| O2A | N | PHE- 199 | 2.79 | 133.31 | H-Bond (Protein Donor) |
| O1G | MG | MG- 302 | 2.39 | 0 | Metal Acceptor |
| O1A | MG | MG- 302 | 2.17 | 0 | Metal Acceptor |