2.190 Å
X-ray
2005-08-17
Name: | 3-oxoacyl-[acyl-carrier-protein] synthase 1 |
---|---|
ID: | FABB_ECOLI |
AC: | P0A953 |
Organism: | Escherichia coli |
Reign: | Bacteria |
TaxID: | 83333 |
EC Number: | 2.3.1.41 |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 100 % |
B-Factor: | 15.493 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.502 | 523.125 |
% Hydrophobic | % Polar |
---|---|
60.00 | 40.00 |
According to VolSite |
HET Code: | TL6 |
---|---|
Formula: | C10H11O2S |
Molecular weight: | 195.258 g/mol |
DrugBank ID: | DB08628 |
Buried Surface Area: | 76.61 % |
Polar Surface area: | 65.42 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 0 |
Rings: | 1 |
Aromatic rings: | 0 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-4.20592 | 40.5472 | 30.1121 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
S1 | SG | CYS- 163 | 3.98 | 0 | Hydrophobic |
C9 | CD2 | PHE- 229 | 3.68 | 0 | Hydrophobic |
C10 | CG | PRO- 272 | 3.76 | 0 | Hydrophobic |
O1 | NE2 | HIS- 298 | 2.92 | 131.04 | H-Bond (Protein Donor) |
C9 | CB | THR- 300 | 3.77 | 0 | Hydrophobic |
C9 | CG2 | THR- 302 | 3.7 | 0 | Hydrophobic |
O1 | NE2 | HIS- 333 | 3.25 | 143.31 | H-Bond (Protein Donor) |
S1 | CD1 | PHE- 392 | 4.28 | 0 | Hydrophobic |
C4 | CE1 | PHE- 392 | 4.11 | 0 | Hydrophobic |
C9 | CZ | PHE- 392 | 4.39 | 0 | Hydrophobic |