1.520 Å
X-ray
2004-10-05
| Name: | Methionine aminopeptidase |
|---|---|
| ID: | MAP1_ECOLI |
| AC: | P0AE18 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 12.944 |
|---|---|
| Number of residues: | 29 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MN MN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.250 | 293.625 |
| % Hydrophobic | % Polar |
|---|---|
| 49.43 | 50.57 |
| According to VolSite | |

| HET Code: | FCD |
|---|---|
| Formula: | C11H6ClO3 |
| Molecular weight: | 221.617 g/mol |
| DrugBank ID: | DB02909 |
| Buried Surface Area: | 66.95 % |
| Polar Surface area: | 53.27 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 2 |
| H-Bond Donors: | 0 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| -2.89307 | -1.0122 | 8.65747 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CL2 | CB | CYS- 59 | 4.45 | 0 | Hydrophobic |
| CL2 | CD2 | TYR- 62 | 4.09 | 0 | Hydrophobic |
| C4 | CB | HIS- 63 | 3.57 | 0 | Hydrophobic |
| C5 | CB | TYR- 65 | 4.46 | 0 | Hydrophobic |
| CL2 | CG | TYR- 65 | 3.62 | 0 | Hydrophobic |
| CL2 | SG | CYS- 70 | 4.19 | 0 | Hydrophobic |
| OA | NE2 | HIS- 178 | 3.23 | 130.25 | H-Bond (Protein Donor) |
| C5 | CZ3 | TRP- 221 | 3.35 | 0 | Hydrophobic |
| OXT | MN | MN- 265 | 2.03 | 0 | Metal Acceptor |
| OB | MN | MN- 266 | 2.21 | 0 | Metal Acceptor |
| OXT | MN | MN- 266 | 2.29 | 0 | Metal Acceptor |