2.000 Å
X-ray
2003-03-03
Name: | Oxygen-insensitive NAD(P)H nitroreductase |
---|---|
ID: | NFSB_ECOLI |
AC: | P38489 |
Organism: | Escherichia coli |
Reign: | Bacteria |
TaxID: | 83333 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 52 % |
B | 48 % |
B-Factor: | 32.701 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 20 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | FMN |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.626 | 553.500 |
% Hydrophobic | % Polar |
---|---|
50.00 | 50.00 |
According to VolSite |
HET Code: | SN2 |
---|---|
Formula: | C11H12Cl2N4O5 |
Molecular weight: | 351.143 g/mol |
DrugBank ID: | DB03228 |
Buried Surface Area: | 54.45 % |
Polar Surface area: | 137.96 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 1 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 2 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
-9.70414 | -14.5108 | 50.0306 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O5 | NZ | LYS- 14 | 3.05 | 0 | Ionic (Protein Cationic) |
O3 | N | THR- 41 | 3.29 | 127.38 | H-Bond (Protein Donor) |
C8 | CE1 | PHE- 70 | 4.24 | 0 | Hydrophobic |
CL1 | CD1 | PHE- 70 | 3.76 | 0 | Hydrophobic |
CL2 | CD | LYS- 119 | 4.34 | 0 | Hydrophobic |
N4 | O | GLY- 120 | 3.43 | 161.67 | H-Bond (Ligand Donor) |
O3 | O2' | FMN- 220 | 3.04 | 171.8 | H-Bond (Protein Donor) |